cytonormpy.FlowSOM.calculate_clusters

cytonormpy.FlowSOM.calculate_clusters#

FlowSOM.calculate_clusters(X, **kwargs)#

Calculates the clusters. Calls flowsom.FlowSOMEstimator.predict() internally.

Parameters:

  • X (ndarray) – The data that are supposed to be predicted.

  • kwargs – Keyword arguments passed to flowsom.FlowSOMEstimator.predict()

Return type:

Cluster annotations stored in a np.ndarray

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