cytonormpy._dataset.DataProviderAnnData.parse_raw_data

cytonormpy._dataset.DataProviderAnnData.parse_raw_data#

DataProviderAnnData.parse_raw_data(file_name, sample_identifier_column=None)#

Parses the expression data stored in the anndata object by the sample identifier.

Parameters:

file_name (Union[str, list[str]]) – The file identifier of which the data are provided. Can be a list of files.

Return type:

DataFrame

Returns:

  • A pandas.DataFrame containing the raw expression data

  • of the specified file.

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